sampo_ps_fabhme export_assigned_comp_id¶
Contents
Overview¶
Warning
sampo_ps_fabhme export_assigned_comp_id command is deprecated. Use hotstart section of SRC instead of _fabhme_assigned_comp_id data column.
sampo_ps_fabhme export_assigned_comp_id exports component IDs assigned to samples.
This command supports the posterior hot-start as follows.
Predict using (a)an ARFF file.
Create (b)an assigned component ID ARFF file by this command.
Learn using both of (a) and (b) ARFF files.
Examples¶
This example outputs an assigned component ID ARFF file to bar directory.
Command:
$ sampo_ps_fabhme export_assigned_comp_id -p foo -c fab1 -s file:///var/process_store_storage -o bar
Output:
@RELATION fab1 @ATTRIBUTE _sid INTEGER @ATTRIBUTE _fabhme_assigned_comp_id {2,3,5, ... ,10} @DATA 0,3 1,3 2,2 3,5 4,10 ...
Output Format¶
The assigned component ID ARFF file consists of the attributes below.
Attribute
Scale
Description
_sid
INTEGER
sample ID
_fabhme_assigned_comp_id
NOMINAL
a set of component IDs to which sample IDs are assigned
Note
FAB engine uses the word ‘component’ with a different meaning from that of SAMPO. Each component in FAB/HME has a prediction formula, and each sample data is assigned to a specific component for prediction.